Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Ocin01_03910 | Ocin01_04854 | A0A1D2NBZ3 | A0A1D2NA45 | Ubiquitin-conjugating enzyme E2 variant 2. | Transmembrane protein. | 0.975 |
Ocin01_03910 | Ocin01_09477 | A0A1D2NBZ3 | A0A1D2MX08 | Ubiquitin-conjugating enzyme E2 variant 2. | Ubiquitin-60S ribosomal protein L40. | 0.993 |
Ocin01_03910 | Ocin01_11124 | A0A1D2NBZ3 | A0A1D2MRN6 | Ubiquitin-conjugating enzyme E2 variant 2. | Gamma-glutamylcyclotransferase. | 0.943 |
Ocin01_03910 | Ocin01_11386 | A0A1D2NBZ3 | A0A1D2MQM4 | Ubiquitin-conjugating enzyme E2 variant 2. | Ubiquitin-60S ribosomal protein L40. | 0.996 |
Ocin01_03910 | Ocin01_14240 | A0A1D2NBZ3 | A0A1D2MHH0 | Ubiquitin-conjugating enzyme E2 variant 2. | Ubiquitin-conjugating enzyme E2-24 kDa; Belongs to the ubiquitin-conjugating enzyme family. | 0.900 |
Ocin01_03910 | Ocin01_15412 | A0A1D2NBZ3 | A0A1D2ME10 | Ubiquitin-conjugating enzyme E2 variant 2. | Ubiquitin-60S ribosomal protein L40. | 0.943 |
Ocin01_03910 | Ocin01_15413 | A0A1D2NBZ3 | A0A1D2ME24 | Ubiquitin-conjugating enzyme E2 variant 2. | Ubiquitin. | 0.943 |
Ocin01_03910 | Ocin01_16029 | A0A1D2NBZ3 | A0A1D2MCF2 | Ubiquitin-conjugating enzyme E2 variant 2. | Ubiquitin. | 0.967 |
Ocin01_03910 | Ocin01_17613 | A0A1D2NBZ3 | A0A1D2M7X6 | Ubiquitin-conjugating enzyme E2 variant 2. | Ubiquitin-60S ribosomal protein L40. | 0.943 |
Ocin01_03910 | Ocin01_18247 | A0A1D2NBZ3 | A0A1D2M687 | Ubiquitin-conjugating enzyme E2 variant 2. | Ubiquitin-conjugating enzyme E2 T; Belongs to the ubiquitin-conjugating enzyme family. | 0.943 |
Ocin01_04854 | Ocin01_03910 | A0A1D2NA45 | A0A1D2NBZ3 | Transmembrane protein. | Ubiquitin-conjugating enzyme E2 variant 2. | 0.975 |
Ocin01_04854 | Ocin01_09477 | A0A1D2NA45 | A0A1D2MX08 | Transmembrane protein. | Ubiquitin-60S ribosomal protein L40. | 0.929 |
Ocin01_04854 | Ocin01_11124 | A0A1D2NA45 | A0A1D2MRN6 | Transmembrane protein. | Gamma-glutamylcyclotransferase. | 0.850 |
Ocin01_04854 | Ocin01_11386 | A0A1D2NA45 | A0A1D2MQM4 | Transmembrane protein. | Ubiquitin-60S ribosomal protein L40. | 0.850 |
Ocin01_04854 | Ocin01_14240 | A0A1D2NA45 | A0A1D2MHH0 | Transmembrane protein. | Ubiquitin-conjugating enzyme E2-24 kDa; Belongs to the ubiquitin-conjugating enzyme family. | 0.805 |
Ocin01_04854 | Ocin01_15412 | A0A1D2NA45 | A0A1D2ME10 | Transmembrane protein. | Ubiquitin-60S ribosomal protein L40. | 0.850 |
Ocin01_04854 | Ocin01_15413 | A0A1D2NA45 | A0A1D2ME24 | Transmembrane protein. | Ubiquitin. | 0.850 |
Ocin01_04854 | Ocin01_16029 | A0A1D2NA45 | A0A1D2MCF2 | Transmembrane protein. | Ubiquitin. | 0.929 |
Ocin01_04854 | Ocin01_17613 | A0A1D2NA45 | A0A1D2M7X6 | Transmembrane protein. | Ubiquitin-60S ribosomal protein L40. | 0.850 |
Ocin01_04854 | Ocin01_18247 | A0A1D2NA45 | A0A1D2M687 | Transmembrane protein. | Ubiquitin-conjugating enzyme E2 T; Belongs to the ubiquitin-conjugating enzyme family. | 0.805 |
page 1 of 5