STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ocin01_04252Protein sprint. (171 aa)    
Predicted Functional Partners:
Ocin01_07376
Ras-related protein Rab-5B.
    
 0.904
Ocin01_08241
Tyrosine-protein kinase Abl.
    
 0.830
Ocin01_08242
Tyrosine-protein kinase Abl; Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
 0.830
Ocin01_16366
Rab5 GDP/GTP exchange factor.
    
 0.809
Ocin01_07707
AN1-type zinc finger protein 4.
    
 0.667
Ocin01_16225
Ras-like protein 2.
    
 0.666
Ocin01_03291
Uncharacterized protein.
    
 0.666
Ocin01_00249
GTPase-activating protein and VPS9 domain-containing protein 1.
    
 0.648
Ocin01_12101
Ankyrin repeat domain-containing protein 27.
    
 0.647
Ocin01_19526
GTP-binding protein Di-Ras2.
    
 0.607
Your Current Organism:
Orchesella cincta
NCBI taxonomy Id: 48709
Other names: O. cincta
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.