STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ocin01_03813ER membrane protein complex subunit 10. (270 aa)    
Predicted Functional Partners:
Ocin01_06873
ER membrane protein complex subunit 7.
    
 
 0.991
Ocin01_09087
ER membrane protein complex subunit 2.
    
 
 0.988
Ocin01_03099
ER membrane protein complex subunit 4; Belongs to the EMC4 family.
   
 
 0.982
Ocin01_09574
ER membrane protein complex subunit 6.
    
 
 0.977
Ocin01_17749
ER membrane protein complex subunit 3.
    
 
 0.949
Ocin01_13410
ER membrane protein complex subunit 3; Belongs to the EMC3 family.
    
 
 0.949
Ocin01_01137
ER membrane protein complex subunit 8.
    
 
 0.931
Ocin01_09250
Unconventional myosin-IXa; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
      
 0.551
Your Current Organism:
Orchesella cincta
NCBI taxonomy Id: 48709
Other names: O. cincta
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.