STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ocin01_03764Vascular endothelial growth factor receptor 1; Belongs to the glycosyl hydrolase 22 family. (524 aa)    
Predicted Functional Partners:
Ocin01_06556
Fibroblast growth factor receptor substrate 2.
    
  0.714
Ocin01_05577
GDNF family receptor alpha-like.
    
  0.680
Ocin01_06911
Phosphatidylinositol 3-kinase regulatory subunit alpha.
    
  0.664
Ocin01_11058
SHC-transforming protein 1.
    
 0.652
Ocin01_17489
Protein E(Sev)2B.
    
 0.636
Ocin01_05696
Protein E(Sev)2B.
    
 0.636
Ocin01_05911
Leucine-rich repeat serine/threonine-protein kinase 1.
    
0.629
Ocin01_05050
Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit.
    
 0.610
Ocin01_13240
Fibroblast growth factor receptor 3.
    
 
0.608
Ocin01_16628
Fibroblast growth factor 17.
    
 0.601
Your Current Organism:
Orchesella cincta
NCBI taxonomy Id: 48709
Other names: O. cincta
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.