STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ocin01_03640T-box transcription factor TBX20. (381 aa)    
Predicted Functional Partners:
Ocin01_09320
Homeobox protein HMX2.
    
 
 0.859
Ocin01_11499
Homeobox protein goosecoid.
    
 
 0.856
Ocin01_09321
Homeobox protein Hmx.
    
 
 0.665
Ocin01_13287
Transducin-like enhancer protein 4.
    
 
 0.613
Ocin01_13288
Protein groucho-2.
    
 
 0.613
Ocin01_09901
Protein groucho-2.
    
 
 0.613
Ocin01_09900
Protein groucho-2.
    
 
 0.613
Ocin01_04274
Homeobox protein Nkx-2.3.
   
 
 0.569
Ocin01_14521
Homeobox protein ceh-9.
    
 
 0.532
Ocin01_06750
Homeobox protein HMX3.
    
 
 0.532
Your Current Organism:
Orchesella cincta
NCBI taxonomy Id: 48709
Other names: O. cincta
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.