STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ocin01_03594Multidrug resistance protein 1B. (1890 aa)    
Predicted Functional Partners:
Ocin01_11238
Huntingtin-interacting protein 1.
    
 0.740
Ocin01_05911
Leucine-rich repeat serine/threonine-protein kinase 1.
    
 0.716
Ocin01_07751
Katanin p60 ATPase-containing subunit A-like 2; Belongs to the AAA ATPase family.
  
 0.709
Ocin01_01557
Mitochondrial-processing peptidase subunit beta.
   
 0.687
Ocin01_11141
Transcription initiation factor TFIID subunit 4.
    
 0.670
Ocin01_06041
Hydroxysteroid dehydrogenase-like protein 2.
   
 0.664
Ocin01_03860
Group XV phospholipase A2.
   
 
 0.662
Ocin01_01772
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
   
 0.655
Ocin01_11690
Inositol 1,4,5-trisphosphate receptor type 1.
    
 0.654
Ocin01_11691
Inositol 1,4,5-trisphosphate receptor.
    
 0.654
Your Current Organism:
Orchesella cincta
NCBI taxonomy Id: 48709
Other names: O. cincta
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.