STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ocin01_03499Peripheral plasma membrane protein CASK; Belongs to the MAGUK family. (498 aa)    
Predicted Functional Partners:
Ocin01_13265
Disks large 5.
    
 0.999
Ocin01_08260
Protein 4.1.
   
 0.999
Ocin01_06356
Regulating synaptic membrane exocytosis protein 2.
   
 0.999
Ocin01_05911
Leucine-rich repeat serine/threonine-protein kinase 1.
    
 0.999
Ocin01_05312
Glutamate [NMDA] receptor subunit 1.
   
 0.999
Ocin01_03301
Protein lin-7 B.
    
 0.999
Ocin01_02958
Protein lin-10.
   
 0.999
Ocin01_02957
Protein lin-10.
   
 0.999
Ocin01_03902
Glutamate receptor ionotropic, NMDA 2B.
   
 0.996
Ocin01_03502
Peripheral plasma membrane protein CASK.
 
  
 0.996
Your Current Organism:
Orchesella cincta
NCBI taxonomy Id: 48709
Other names: O. cincta
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.