STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ocin01_03396Long-chain-fatty-acid--CoA ligase 4. (706 aa)    
Predicted Functional Partners:
Ocin01_05911
Leucine-rich repeat serine/threonine-protein kinase 1.
   
 0.881
Ocin01_04408
Cellular tumor antigen p53.
    
 0.874
Ocin01_03256
Non-specific lipid-transfer protein; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.858
Ocin01_06041
Hydroxysteroid dehydrogenase-like protein 2.
  
 0.836
Ocin01_07333
Fatty acid synthase.
  
 0.835
Ocin01_04571
Lysosomal thioesterase PPT2.
     
 0.835
Ocin01_05440
Palmitoyl-protein thioesterase 1.
     
 0.834
Ocin01_09872
Patatin-like phospholipase domain-containing protein 2.
   
 
 0.822
Ocin01_07928
Carnitine O-palmitoyltransferase 1, liver isoform; Belongs to the carnitine/choline acetyltransferase family.
   
 
 0.807
Ocin01_04835
Carnitine O-palmitoyltransferase 1, liver isoform.
   
 
 0.807
Your Current Organism:
Orchesella cincta
NCBI taxonomy Id: 48709
Other names: O. cincta
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.