STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ocin01_03146tRNA modification GTPase GTPBP3, mitochondrial. (323 aa)    
Predicted Functional Partners:
Ocin01_06223
Protein MTO1, mitochondrial.
 
 0.994
Ocin01_14651
Endoplasmic reticulum-Golgi intermediate compartment protein 1.
  
 0.985
Ocin01_14223
Endoplasmic reticulum-Golgi intermediate compartment protein 3.
  
 0.985
Ocin01_04109
Endoplasmic reticulum-Golgi intermediate compartment protein 2.
  
 0.985
Ocin01_01733
39S ribosomal protein L11, mitochondrial; Belongs to the universal ribosomal protein uL11 family.
    
 
 0.985
Ocin01_15806
rRNA methyltransferase 3, mitochondrial.
   
 
 0.977
Ocin01_11265
39S ribosomal protein L3, mitochondrial.
    
 
 0.958
Ocin01_02182
Pseudouridylate synthase 7.
   
   0.956
Ocin01_05970
Putative 39S ribosomal protein L24, mitochondrial.
    
   0.955
Ocin01_02388
Mitochondrial assembly of ribosomal large subunit protein 1.
   
   0.955
Your Current Organism:
Orchesella cincta
NCBI taxonomy Id: 48709
Other names: O. cincta
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.