STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ocin01_03012Protoheme IX farnesyltransferase, mitochondrial. (502 aa)    
Predicted Functional Partners:
Ocin01_17410
Cytochrome c oxidase assembly protein COX15.
  
 0.993
Ocin01_01947
Cytochrome c oxidase assembly protein COX11, mitochondrial.
  
 0.993
Ocin01_03911
Cytochrome c1, heme protein, mitochondrial.
  
 0.938
Ocin01_10123
Cytochrome c heme lyase; Links covalently the heme group to the apoprotein of cytochrome c.
   
 
 0.922
Ocin01_09503
PP1c_bdg domain-containing protein.
  
 
 0.919
Ocin01_00526
Cytochrome c; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.
  
 
 0.919
Ocin01_06073
Cytochrome c oxidase subunit 5A, mitochondrial.
   
 
 0.906
Ocin01_11686
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
   
 
 0.902
Ocin01_00751
4-hydroxybenzoate polyprenyltransferase, mitochondrial; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of coenzyme Q (CoQ) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate.
    
 0.897
Ocin01_04944
Cytochrome c oxidase copper chaperone.
     
 0.894
Your Current Organism:
Orchesella cincta
NCBI taxonomy Id: 48709
Other names: O. cincta
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.