STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ocin01_02806DNA/RNA-binding protein KIN17. (394 aa)    
Predicted Functional Partners:
Ocin01_07142
RNA-binding motif protein, X-linked 2.
   
   0.910
Ocin01_03367
Splicing factor 3B subunit 3.
    
   0.897
Ocin01_00416
Splicing factor 3B subunit 1.
    
   0.897
Ocin01_09436
Uncharacterized protein.
   
   0.869
Ocin01_03915
Uncharacterized protein.
    
   0.857
Ocin01_00747
Tr-type G domain-containing protein.
    
   0.857
Ocin01_12399
Pre-mRNA-processing factor 17.
   
   0.856
Ocin01_04371
Splicing factor 3A subunit 3.
    
 
 0.833
Ocin01_10206
Protein-lysine N-methyltransferase EEF2KMT.
    
 0.787
Ocin01_03726
Tectonic-1.
    
 0.787
Your Current Organism:
Orchesella cincta
NCBI taxonomy Id: 48709
Other names: O. cincta
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.