STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ocin01_03052Integrator complex subunit 8. (238 aa)    
Predicted Functional Partners:
Ocin01_01800
Mothers against decapentaplegic homolog.
   
 0.921
Ocin01_06467
E3 ubiquitin-protein ligase.
    
 0.877
Ocin01_11267
Integrator complex subunit 1.
    
 0.861
Ocin01_11016
Ski oncogene.
   
 0.861
Ocin01_11017
Ski oncogene.
   
 0.861
Ocin01_04838
Integrator complex subunit 2.
   
 0.860
Ocin01_16909
Integrator complex subunit 7.
   
 0.856
Ocin01_02104
Transcriptional coactivator YAP1.
    
 0.854
Ocin01_03139
Integrator complex subunit 3.
    
 0.851
Ocin01_14955
Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.
   
 0.847
Your Current Organism:
Orchesella cincta
NCBI taxonomy Id: 48709
Other names: O. cincta
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.