STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ocin01_02518Protein arginine N-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. (635 aa)    
Predicted Functional Partners:
Ocin01_04883
Pre-mRNA 3' end processing protein WDR33.
   
 0.997
Ocin01_04794
Methylosome subunit pICln.
   
 0.997
Ocin01_06333
Membrane-associated tyrosine-and threonine-specific cdc2-inhibitory kinase; Belongs to the protein kinase superfamily.
    
 0.988
Ocin01_02990
Serine/threonine-protein kinase RIO1; Belongs to the protein kinase superfamily. RIO-type Ser/Thr kinase family.
    
 
 0.987
Ocin01_06269
Serine/threonine-protein kinase BRSK1.
    
 0.900
Ocin01_06271
Serine/threonine kinase SAD-1.
    
 0.900
Ocin01_06270
Serine/threonine kinase SAD-1.
    
 0.900
Ocin01_12468
Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.
   
 0.879
Ocin01_03588
Small nuclear ribonucleoprotein Sm D3.
    
 0.874
Ocin01_03186
U7 snRNA-associated Sm-like protein LSm10.
   
 0.830
Your Current Organism:
Orchesella cincta
NCBI taxonomy Id: 48709
Other names: O. cincta
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