STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ocin01_02387Ribonuclease P protein subunit p30. (298 aa)    
Predicted Functional Partners:
Ocin01_10281
Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends.
  
 0.999
Ocin01_07263
Ribonuclease P protein component 4.
   
 0.999
Ocin01_03562
Ribonucleases P/MRP protein subunit POP1.
   
 0.999
Ocin01_02661
Ribonuclease P protein subunit p38.
   
 0.995
Ocin01_19156
Ribonuclease P protein subunit p25-like protein.
    
 0.979
Ocin01_11794
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
 0.977
Ocin01_06017
Ribonuclease P protein subunit p25-like protein.
    
 0.976
Ocin01_04651
H/ACA ribonucleoprotein complex subunit 2-like protein.
   
 0.927
Ocin01_05427
Ribonuclease P protein subunit p20.
    
 0.923
Ocin01_13680
40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.
   
 0.922
Your Current Organism:
Orchesella cincta
NCBI taxonomy Id: 48709
Other names: O. cincta
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.