STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ocin01_02044Neurogenic differentiation factor 1. (272 aa)    
Predicted Functional Partners:
Ocin01_15054
Transcription factor 12.
    
 
 0.887
Ocin01_06841
Insulinoma-associated protein 2.
   
 0.757
Ocin01_15130
Enhancer of split mgamma protein.
   
 0.734
Ocin01_03695
Protein deadpan.
   
 0.734
Ocin01_12585
Enhancer of split mbeta protein.
    
 0.685
Ocin01_08811
Homeobox protein vnd.
   
 0.676
Ocin01_01085
Homeobox protein XENK-2.
   
 0.676
Ocin01_07825
Hepatocyte nuclear factor 6.
   
 
 0.629
Ocin01_01996
Basic helix-loop-helix neural transcription factor TAP.
  
  
0.628
Ocin01_06453
Paired box protein Pax-6.
  
 0.593
Your Current Organism:
Orchesella cincta
NCBI taxonomy Id: 48709
Other names: O. cincta
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.