STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ocin01_01940Tetraspanin. (238 aa)    
Predicted Functional Partners:
Ocin01_13240
Fibroblast growth factor receptor 3.
    
 0.811
Ocin01_16716
PRKCA-binding protein.
     
 0.707
Ocin01_11577
PRKCA-binding protein.
     
 0.707
Ocin01_00030
Tyrosine-protein kinase-like otk; Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
 0.661
Ocin01_04579
Glutamate receptor-interacting protein 2.
    
  0.601
Ocin01_13089
Receptor protein-tyrosine kinase.
    
 0.588
Ocin01_03307
Ephrin type-A receptor 5; Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
  0.587
Ocin01_06911
Phosphatidylinositol 3-kinase regulatory subunit alpha.
    
  0.568
Ocin01_05050
Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit.
    
 0.535
Ocin01_16406
Cytochrome b5 reductase 4; Belongs to the cytochrome b5 family.
    
  0.533
Your Current Organism:
Orchesella cincta
NCBI taxonomy Id: 48709
Other names: O. cincta
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