STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ocin01_01817Uncharacterized protein. (758 aa)    
Predicted Functional Partners:
Ocin01_01440
Protein LTV1.
    
 0.846
Ocin01_06240
Period circadian protein.
    
 0.810
Ocin01_12076
Bystin.
    
 0.809
Ocin01_04171
Serine/threonine-protein kinase RIO2.
    
 0.806
Ocin01_06241
Period circadian protein 2.
    
 0.779
Ocin01_09316
Barrier-to-autointegration factor.
    
 0.759
Ocin01_07645
Barrier-to-autointegration factor-like protein.
    
 0.759
Ocin01_02561
Uncharacterized protein.
    
 0.759
Ocin01_01810
Pre-rRNA-processing protein TSR1.
    
 0.743
Ocin01_02088
RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family.
    
 0.704
Your Current Organism:
Orchesella cincta
NCBI taxonomy Id: 48709
Other names: O. cincta
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.