Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Ocin01_00205 | Ocin01_01358 | A0A1D2NMG3 | A0A1D2NJB1 | Ras-related protein Rab-34. | Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes. | 0.655 |
Ocin01_00205 | Ocin01_01669 | A0A1D2NMG3 | A0A1D2NJ52 | Ras-related protein Rab-34. | Dynactin subunit 1. | 0.743 |
Ocin01_00205 | Ocin01_01803 | A0A1D2NMG3 | A0A1D2NHY5 | Ras-related protein Rab-34. | Protein bicaudal D. | 0.907 |
Ocin01_00205 | Ocin01_02084 | A0A1D2NMG3 | A0A1D2NH59 | Ras-related protein Rab-34. | Ras-related protein Rab6. | 0.568 |
Ocin01_00205 | Ocin01_10190 | A0A1D2NMG3 | A0A1D2MTR3 | Ras-related protein Rab-34. | Putative dynactin subunit 2. | 0.624 |
Ocin01_01358 | Ocin01_00205 | A0A1D2NJB1 | A0A1D2NMG3 | Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes. | Ras-related protein Rab-34. | 0.655 |
Ocin01_01358 | Ocin01_01669 | A0A1D2NJB1 | A0A1D2NJ52 | Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes. | Dynactin subunit 1. | 0.990 |
Ocin01_01358 | Ocin01_01803 | A0A1D2NJB1 | A0A1D2NHY5 | Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes. | Protein bicaudal D. | 0.977 |
Ocin01_01358 | Ocin01_02084 | A0A1D2NJB1 | A0A1D2NH59 | Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes. | Ras-related protein Rab6. | 0.695 |
Ocin01_01358 | Ocin01_09372 | A0A1D2NJB1 | A0A1D2MX88 | Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes. | Dynein heavy chain 10, axonemal. | 0.892 |
Ocin01_01358 | Ocin01_10190 | A0A1D2NJB1 | A0A1D2MTR3 | Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes. | Putative dynactin subunit 2. | 0.975 |
Ocin01_01358 | Ocin01_10514 | A0A1D2NJB1 | A0A1D2MSW0 | Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes. | Cytoplasmic dynein 1 intermediate chain 2. | 0.993 |
Ocin01_01358 | Ocin01_17141 | A0A1D2NJB1 | A0A1D2M9D2 | Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes. | Lissencephaly-1 A. | 0.893 |
Ocin01_01669 | Ocin01_00205 | A0A1D2NJ52 | A0A1D2NMG3 | Dynactin subunit 1. | Ras-related protein Rab-34. | 0.743 |
Ocin01_01669 | Ocin01_01358 | A0A1D2NJ52 | A0A1D2NJB1 | Dynactin subunit 1. | Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes. | 0.990 |
Ocin01_01669 | Ocin01_01803 | A0A1D2NJ52 | A0A1D2NHY5 | Dynactin subunit 1. | Protein bicaudal D. | 0.988 |
Ocin01_01669 | Ocin01_02084 | A0A1D2NJ52 | A0A1D2NH59 | Dynactin subunit 1. | Ras-related protein Rab6. | 0.797 |
Ocin01_01669 | Ocin01_09372 | A0A1D2NJ52 | A0A1D2MX88 | Dynactin subunit 1. | Dynein heavy chain 10, axonemal. | 0.836 |
Ocin01_01669 | Ocin01_10190 | A0A1D2NJ52 | A0A1D2MTR3 | Dynactin subunit 1. | Putative dynactin subunit 2. | 0.999 |
Ocin01_01669 | Ocin01_10514 | A0A1D2NJ52 | A0A1D2MSW0 | Dynactin subunit 1. | Cytoplasmic dynein 1 intermediate chain 2. | 0.996 |
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