STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ocin01_01803Protein bicaudal D. (771 aa)    
Predicted Functional Partners:
Ocin01_10190
Putative dynactin subunit 2.
    
 0.990
Ocin01_01669
Dynactin subunit 1.
    
 0.988
Ocin01_02084
Ras-related protein Rab6.
    
 0.979
Ocin01_01358
Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes.
    
 0.977
Ocin01_10514
Cytoplasmic dynein 1 intermediate chain 2.
    
  0.963
Ocin01_12202
Exonuclease 3'-5' domain-containing protein 1.
    
 
 0.934
Ocin01_01689
Exonuclease 3'-5' domain-containing protein 1.
    
 
 0.909
Ocin01_00205
Ras-related protein Rab-34.
    
 0.907
Ocin01_17141
Lissencephaly-1 A.
    
 0.830
Ocin01_09372
Dynein heavy chain 10, axonemal.
    
 0.802
Your Current Organism:
Orchesella cincta
NCBI taxonomy Id: 48709
Other names: O. cincta
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