STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ocin01_01522Serine/arginine-rich splicing factor 11. (592 aa)    
Predicted Functional Partners:
Ocin01_04646
Serine/arginine-rich splicing factor 2.
   
 0.852
Ocin01_07594
Nipped-B-like protein B.
   
 
 0.844
Ocin01_11188
La-related protein 7.
   
 0.838
Ocin01_10549
Serine/arginine repetitive matrix protein 1.
   
 0.819
Ocin01_13684
Polyadenylate-binding protein 2.
   
 0.792
Ocin01_07234
RNA-binding protein 1.
   
 0.792
Ocin01_07050
RNA-binding protein 1.
   
 0.792
Ocin01_14335
Serine-arginine protein 55.
   
 0.774
Ocin01_14336
Serine-arginine protein 55.
   
 0.774
Ocin01_12715
Zinc finger Ran-binding domain-containing protein 2.
   
 0.769
Your Current Organism:
Orchesella cincta
NCBI taxonomy Id: 48709
Other names: O. cincta
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.