STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ocin01_01458Kelch-like protein 30. (392 aa)    
Predicted Functional Partners:
Ocin01_04900
39S ribosomal protein L46, mitochondrial.
   
 
 0.677
Ocin01_05759
50S ribosomal protein L27.
   
 
 0.671
Ocin01_14553
Putative 39S ribosomal protein L23, mitochondrial.
   
 
 0.667
Ocin01_02326
39S ribosomal protein L47, mitochondrial.
   
 
 0.667
Ocin01_11265
39S ribosomal protein L3, mitochondrial.
   
 
 0.660
Ocin01_05136
28S ribosomal protein S10, mitochondrial.
   
 
 0.655
Ocin01_00521
Putative 28S ribosomal protein S6, mitochondrial.
   
   0.655
Ocin01_17244
39S ribosomal protein L30, mitochondrial.
   
 
 0.650
Ocin01_04160
39S ribosomal protein L4, mitochondrial.
   
   0.650
Ocin01_09380
28S ribosomal protein S11, mitochondrial.
   
   0.647
Your Current Organism:
Orchesella cincta
NCBI taxonomy Id: 48709
Other names: O. cincta
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.