STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ocin01_01115Elongation of very long chain fatty acids protein. (255 aa)    
Predicted Functional Partners:
Ocin01_02260
Putative very-long-chain enoyl-CoA reductase art-1.
    
 0.562
Ocin01_02224
Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase; Catalyzes the third of the four reactions of the long-chain fatty acids elongation cycle. This endoplasmic reticulum-bound enzymatic process, allows the addition of two carbons to the chain of long- and very long-chain fatty acids/VLCFAs per cycle. This enzyme catalyzes the dehydration of the 3-hydroxyacyl-CoA intermediate into trans-2,3-enoyl-CoA, within each cycle of fatty acid elongation. Thereby, it participates to the production of VLCFAs of different chain lengths that are involved in multiple biological processes as precursors [...]
     
 0.537
Ocin01_17115
Long-chain-fatty-acid--CoA ligase 4.
   
 
  0.440
Ocin01_03396
Long-chain-fatty-acid--CoA ligase 4.
   
 
  0.440
Ocin01_17846
Cytochrome b5; Belongs to the cytochrome b5 family.
     
 0.431
Ocin01_02783
39S ribosomal protein L37, mitochondrial.
     
 0.431
Ocin01_02824
Cytochrome b5; Belongs to the cytochrome b5 family.
     
 0.431
Ocin01_11308
Long-chain-fatty-acid--CoA ligase 1.
   
 
  0.404
Ocin01_05963
Long-chain-fatty-acid--CoA ligase ACSBG2.
   
 
  0.404
Ocin01_05962
Long-chain-fatty-acid--CoA ligase ACSBG2.
   
 
  0.404
Your Current Organism:
Orchesella cincta
NCBI taxonomy Id: 48709
Other names: O. cincta
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