STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ocin01_01063Neuronal acetylcholine receptor subunit alpha-7; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (503 aa)    
Predicted Functional Partners:
Ocin01_04735
Acetylcholine receptor subunit alpha-L1.
  
0.685
Ocin01_06081
Neuronal acetylcholine receptor subunit alpha-6; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
  
0.682
Ocin01_09822
Acetylcholine receptor subunit alpha-type acr-16; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
   
0.657
Ocin01_00861
Tyrosine-protein kinase.
    
  0.587
Ocin01_05312
Glutamate [NMDA] receptor subunit 1.
   
 
 0.471
Ocin01_08520
Gamma-aminobutyric acid receptor subunit beta; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
  
   0.468
Ocin01_01894
Gamma-aminobutyric acid receptor subunit beta.
  
   0.453
Ocin01_02256
RIC3 domain-containing protein.
    
 
 0.410
Your Current Organism:
Orchesella cincta
NCBI taxonomy Id: 48709
Other names: O. cincta
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.