STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ocin01_00966Hypoxia-inducible factor 1-alpha. (917 aa)    
Predicted Functional Partners:
Ocin01_11132
Egl nine 1.
    
 0.998
Ocin01_02949
Aryl hydrocarbon receptor nuclear translocator.
   
0.997
Ocin01_03943
Von Hippel-Lindau disease tumor suppressor.
    
 0.994
Ocin01_03115
Transcription elongation factor B polypeptide 1; Belongs to the SKP1 family.
    
 0.984
Ocin01_15627
Transcription elongation factor B polypeptide 2.
    
 0.981
Ocin01_03720
Hypoxia-inducible factor 1-alpha inhibitor.
    
 0.975
Ocin01_11722
Cullin-2; Belongs to the cullin family.
    
 0.954
Ocin01_10203
Mitogen-activated protein kinase.
    
 0.897
Ocin01_11921
CREB-binding protein.
    
 0.888
Ocin01_08978
NAD-dependent protein deacetylase Sirt6.
    
 0.888
Your Current Organism:
Orchesella cincta
NCBI taxonomy Id: 48709
Other names: O. cincta
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.