Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Ocin01_00414 | Ocin01_01011 | A0A1D2NM17 | A0A1D2NK73 | Parafibromin. | Alpha-L-arabinofuranosidase A. | 0.803 |
Ocin01_00414 | Ocin01_03956 | A0A1D2NM17 | A0A1D2NBW7 | Parafibromin. | Another transcription unit protein. | 0.999 |
Ocin01_01011 | Ocin01_00414 | A0A1D2NK73 | A0A1D2NM17 | Alpha-L-arabinofuranosidase A. | Parafibromin. | 0.803 |
Ocin01_01011 | Ocin01_01472 | A0A1D2NK73 | A0A1D2NJ00 | Alpha-L-arabinofuranosidase A. | Anaphase-promoting complex subunit 1. | 0.802 |
Ocin01_01011 | Ocin01_03300 | A0A1D2NK73 | A0A1D2NDP8 | Alpha-L-arabinofuranosidase A. | Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. | 0.904 |
Ocin01_01011 | Ocin01_03956 | A0A1D2NK73 | A0A1D2NBW7 | Alpha-L-arabinofuranosidase A. | Another transcription unit protein. | 0.802 |
Ocin01_01011 | Ocin01_04540 | A0A1D2NK73 | A0A1D2NA51 | Alpha-L-arabinofuranosidase A. | Anaphase-promoting complex subunit 5. | 0.801 |
Ocin01_01011 | Ocin01_05871 | A0A1D2NK73 | A0A1D2N6C7 | Alpha-L-arabinofuranosidase A. | Anaphase-promoting complex subunit 2; Belongs to the cullin family. | 0.797 |
Ocin01_01011 | Ocin01_05911 | A0A1D2NK73 | A0A1D2N738 | Alpha-L-arabinofuranosidase A. | Leucine-rich repeat serine/threonine-protein kinase 1. | 0.858 |
Ocin01_01011 | Ocin01_08410 | A0A1D2NK73 | A0A1D2MZ37 | Alpha-L-arabinofuranosidase A. | Intraflagellar transport protein 52. | 0.792 |
Ocin01_01011 | Ocin01_09395 | A0A1D2NK73 | A0A1D2MWV6 | Alpha-L-arabinofuranosidase A. | Anaphase-promoting complex subunit 4. | 0.802 |
Ocin01_01011 | Ocin01_11807 | A0A1D2NK73 | A0A1D2MP57 | Alpha-L-arabinofuranosidase A. | Cell division cycle protein 16. | 0.802 |
Ocin01_01472 | Ocin01_01011 | A0A1D2NJ00 | A0A1D2NK73 | Anaphase-promoting complex subunit 1. | Alpha-L-arabinofuranosidase A. | 0.802 |
Ocin01_01472 | Ocin01_04540 | A0A1D2NJ00 | A0A1D2NA51 | Anaphase-promoting complex subunit 1. | Anaphase-promoting complex subunit 5. | 0.999 |
Ocin01_01472 | Ocin01_05871 | A0A1D2NJ00 | A0A1D2N6C7 | Anaphase-promoting complex subunit 1. | Anaphase-promoting complex subunit 2; Belongs to the cullin family. | 0.999 |
Ocin01_01472 | Ocin01_09395 | A0A1D2NJ00 | A0A1D2MWV6 | Anaphase-promoting complex subunit 1. | Anaphase-promoting complex subunit 4. | 0.999 |
Ocin01_01472 | Ocin01_11807 | A0A1D2NJ00 | A0A1D2MP57 | Anaphase-promoting complex subunit 1. | Cell division cycle protein 16. | 0.999 |
Ocin01_03300 | Ocin01_01011 | A0A1D2NDP8 | A0A1D2NK73 | Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. | Alpha-L-arabinofuranosidase A. | 0.904 |
Ocin01_03300 | Ocin01_05911 | A0A1D2NDP8 | A0A1D2N738 | Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. | Leucine-rich repeat serine/threonine-protein kinase 1. | 0.739 |
Ocin01_03956 | Ocin01_00414 | A0A1D2NBW7 | A0A1D2NM17 | Another transcription unit protein. | Parafibromin. | 0.999 |
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