STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ocin01_00977Exostosin-2; Belongs to the glycosyltransferase 47 family. (742 aa)    
Predicted Functional Partners:
Ocin01_03340
Exostosin-1; Belongs to the glycosyltransferase 47 family.
    
0.994
Ocin01_14968
Exostosin-3; Belongs to the glycosyltransferase 47 family.
  
 
0.860
Ocin01_13747
Bifunctional heparan sulfate N-deacetylase/N-sulfotransferase.
    
 
 0.599
Ocin01_09107
Adenosine 3'-phospho 5'-phosphosulfate transporter 1.
   
  
 0.569
Ocin01_14258
Pikachurin.
     
 0.538
Ocin01_03309
Agrin.
     
 0.538
Ocin01_03312
Agrin.
     
 0.538
Ocin01_03311
Agrin.
     
 0.538
Ocin01_01565
Basement membrane-specific heparan sulfate proteoglycan core protein.
     
 0.538
Ocin01_00406
Basement membrane-specific heparan sulfate proteoglycan core protein.
     
 0.533
Your Current Organism:
Orchesella cincta
NCBI taxonomy Id: 48709
Other names: O. cincta
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.