STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ocin01_00743NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial. (182 aa)    
Predicted Functional Partners:
Ocin01_16534
NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial.
   
 0.999
Ocin01_16431
NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial; Belongs to the complex I 20 kDa subunit family.
   
 0.999
Ocin01_16214
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 4.
   
 0.999
Ocin01_15574
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9; Belongs to the complex I LYR family.
   
 0.999
Ocin01_15044
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10.
   
 0.999
Ocin01_14817
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7.
   
 0.999
Ocin01_09449
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5.
   
 0.999
Ocin01_09450
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 6.
   
 0.999
Ocin01_07997
NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial; Belongs to the complex I 30 kDa subunit family.
   
 0.999
Ocin01_07320
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6.
   
 0.999
Your Current Organism:
Orchesella cincta
NCBI taxonomy Id: 48709
Other names: O. cincta
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.