STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ocin01_00583Cadherin-23. (2020 aa)    
Predicted Functional Partners:
Ocin01_04644
Protocadherin-15.
  
0.875
Ocin01_05444
Catenin delta-2.
    
 0.846
Ocin01_03339
Armadillo segment polarity protein.
    
 0.845
Ocin01_17026
Catenin alpha.
    
 0.796
Ocin01_08861
Catenin alpha.
    
 0.796
Ocin01_05930
Armadillo repeat-containing protein 2.
    
 0.796
Ocin01_14458
Uridine kinase; Belongs to the uridine kinase family.
    
 0.783
Ocin01_08238
Uridine kinase; Belongs to the uridine kinase family.
    
 0.783
Ocin01_15003
Lipoma HMGIC fusion partner-like 3 protein.
   
 0.767
Ocin01_03042
Nicotinamide riboside kinase 1.
    
 0.757
Your Current Organism:
Orchesella cincta
NCBI taxonomy Id: 48709
Other names: O. cincta
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.