Ocin01_00375 protein (Orchesella cincta) - STRING interaction network

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Score

Ocin01_00375

Protein lin-28. (146 aa)

Predicted Functional Partners:

Ocin01_02345

0.787

Ocin01_16766

0.786

Ocin01_00823

0.722

Ocin01_03588

0.710

Ocin01_05194

0.709

Ocin01_04363

0.709

Ocin01_12636

0.707

Ocin01_04250

0.705

Ocin01_10405

0.698

Ocin01_05759

0.690

Your Current Organism:

Orchesella cincta

NCBI taxonomy Id: 48709
Other names: O. cincta

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Ocin01_00375	Ocin01_00823	A0A1D2NM73	A0A1D2NKQ4	Protein lin-28.	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing and RNA-mediated gene silencing (RNAi). The CBC complex is involved in miRNA-mediated RNA interference and is required for primary microRNAs (miRNAs) processing. Also involved in innate immunity via the short interfering RNAs (siRNAs) processing machinery by restricting the viral RNA production. In the CBC complex, Cbp20 recognizes and binds capped RNAs (m7GpppG-capped RNA) but requ [...]	0.722
Ocin01_00375	Ocin01_02345	A0A1D2NM73	A0A1D2NGV1	Protein lin-28.	Symplekin.	0.787
Ocin01_00375	Ocin01_03588	A0A1D2NM73	A0A1D2NCZ5	Protein lin-28.	Small nuclear ribonucleoprotein Sm D3.	0.710
Ocin01_00375	Ocin01_04250	A0A1D2NM73	A0A1D2NAZ6	Protein lin-28.	Small nuclear ribonucleoprotein G.	0.705
Ocin01_00375	Ocin01_04363	A0A1D2NM73	A0A1D2NAQ5	Protein lin-28.	G1/S-specific cyclin-D3; Belongs to the cyclin family.	0.709
Ocin01_00375	Ocin01_05194	A0A1D2NM73	A0A1D2N8A0	Protein lin-28.	Small nuclear ribonucleoprotein F; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.709
Ocin01_00375	Ocin01_05759	A0A1D2NM73	A0A1D2N7K3	Protein lin-28.	50S ribosomal protein L27.	0.690
Ocin01_00375	Ocin01_10405	A0A1D2NM73	A0A1D2MTP8	Protein lin-28.	Putative ATP-dependent RNA helicase me31b; Belongs to the DEAD box helicase family.	0.698
Ocin01_00375	Ocin01_12636	A0A1D2NM73	A0A1D2MM01	Protein lin-28.	40S ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family.	0.707
Ocin01_00375	Ocin01_16766	A0A1D2NM73	A0A1D2MAA5	Protein lin-28.	Heterogeneous nuclear ribonucleoprotein A1, A2/B1.	0.786
Ocin01_00823	Ocin01_00375	A0A1D2NKQ4	A0A1D2NM73	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing and RNA-mediated gene silencing (RNAi). The CBC complex is involved in miRNA-mediated RNA interference and is required for primary microRNAs (miRNAs) processing. Also involved in innate immunity via the short interfering RNAs (siRNAs) processing machinery by restricting the viral RNA production. In the CBC complex, Cbp20 recognizes and binds capped RNAs (m7GpppG-capped RNA) but requ [...]	Protein lin-28.	0.722
Ocin01_00823	Ocin01_02345	A0A1D2NKQ4	A0A1D2NGV1	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing and RNA-mediated gene silencing (RNAi). The CBC complex is involved in miRNA-mediated RNA interference and is required for primary microRNAs (miRNAs) processing. Also involved in innate immunity via the short interfering RNAs (siRNAs) processing machinery by restricting the viral RNA production. In the CBC complex, Cbp20 recognizes and binds capped RNAs (m7GpppG-capped RNA) but requ [...]	Symplekin.	0.792
Ocin01_00823	Ocin01_03588	A0A1D2NKQ4	A0A1D2NCZ5	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing and RNA-mediated gene silencing (RNAi). The CBC complex is involved in miRNA-mediated RNA interference and is required for primary microRNAs (miRNAs) processing. Also involved in innate immunity via the short interfering RNAs (siRNAs) processing machinery by restricting the viral RNA production. In the CBC complex, Cbp20 recognizes and binds capped RNAs (m7GpppG-capped RNA) but requ [...]	Small nuclear ribonucleoprotein Sm D3.	0.996
Ocin01_00823	Ocin01_04250	A0A1D2NKQ4	A0A1D2NAZ6	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing and RNA-mediated gene silencing (RNAi). The CBC complex is involved in miRNA-mediated RNA interference and is required for primary microRNAs (miRNAs) processing. Also involved in innate immunity via the short interfering RNAs (siRNAs) processing machinery by restricting the viral RNA production. In the CBC complex, Cbp20 recognizes and binds capped RNAs (m7GpppG-capped RNA) but requ [...]	Small nuclear ribonucleoprotein G.	0.998
Ocin01_00823	Ocin01_05194	A0A1D2NKQ4	A0A1D2N8A0	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing and RNA-mediated gene silencing (RNAi). The CBC complex is involved in miRNA-mediated RNA interference and is required for primary microRNAs (miRNAs) processing. Also involved in innate immunity via the short interfering RNAs (siRNAs) processing machinery by restricting the viral RNA production. In the CBC complex, Cbp20 recognizes and binds capped RNAs (m7GpppG-capped RNA) but requ [...]	Small nuclear ribonucleoprotein F; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.997
Ocin01_00823	Ocin01_10405	A0A1D2NKQ4	A0A1D2MTP8	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing and RNA-mediated gene silencing (RNAi). The CBC complex is involved in miRNA-mediated RNA interference and is required for primary microRNAs (miRNAs) processing. Also involved in innate immunity via the short interfering RNAs (siRNAs) processing machinery by restricting the viral RNA production. In the CBC complex, Cbp20 recognizes and binds capped RNAs (m7GpppG-capped RNA) but requ [...]	Putative ATP-dependent RNA helicase me31b; Belongs to the DEAD box helicase family.	0.717
Ocin01_00823	Ocin01_12636	A0A1D2NKQ4	A0A1D2MM01	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing and RNA-mediated gene silencing (RNAi). The CBC complex is involved in miRNA-mediated RNA interference and is required for primary microRNAs (miRNAs) processing. Also involved in innate immunity via the short interfering RNAs (siRNAs) processing machinery by restricting the viral RNA production. In the CBC complex, Cbp20 recognizes and binds capped RNAs (m7GpppG-capped RNA) but requ [...]	40S ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family.	0.830
Ocin01_00823	Ocin01_16766	A0A1D2NKQ4	A0A1D2MAA5	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing and RNA-mediated gene silencing (RNAi). The CBC complex is involved in miRNA-mediated RNA interference and is required for primary microRNAs (miRNAs) processing. Also involved in innate immunity via the short interfering RNAs (siRNAs) processing machinery by restricting the viral RNA production. In the CBC complex, Cbp20 recognizes and binds capped RNAs (m7GpppG-capped RNA) but requ [...]	Heterogeneous nuclear ribonucleoprotein A1, A2/B1.	0.864
Ocin01_02345	Ocin01_00375	A0A1D2NGV1	A0A1D2NM73	Symplekin.	Protein lin-28.	0.787
Ocin01_02345	Ocin01_00823	A0A1D2NGV1	A0A1D2NKQ4	Symplekin.	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing and RNA-mediated gene silencing (RNAi). The CBC complex is involved in miRNA-mediated RNA interference and is required for primary microRNAs (miRNAs) processing. Also involved in innate immunity via the short interfering RNAs (siRNAs) processing machinery by restricting the viral RNA production. In the CBC complex, Cbp20 recognizes and binds capped RNAs (m7GpppG-capped RNA) but requ [...]	0.792