STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ocin01_00141PDGF_2 domain-containing protein. (439 aa)    
Predicted Functional Partners:
Ocin01_12658
Latrophilin-3; Belongs to the G-protein coupled receptor 2 family.
    
 
 0.994
Ocin01_07436
Latrophilin Cirl; Belongs to the G-protein coupled receptor 2 family.
    
 
 0.924
Ocin01_13240
Fibroblast growth factor receptor 3.
   
 
  0.788
Ocin01_14258
Pikachurin.
    
  0.708
Ocin01_13089
Receptor protein-tyrosine kinase.
    
 0.672
Ocin01_00030
Tyrosine-protein kinase-like otk; Belongs to the protein kinase superfamily. Tyr protein kinase family.
   
 0.639
Ocin01_11493
Cytochrome c peroxidase, mitochondrial; Belongs to the peroxidase family.
    
 0.618
Ocin01_08399
Receptor protein-tyrosine kinase.
    
 0.606
Ocin01_03307
Ephrin type-A receptor 5; Belongs to the protein kinase superfamily. Tyr protein kinase family.
     
 0.605
Ocin01_10223
Noelin-3.
    
 
 0.603
Your Current Organism:
Orchesella cincta
NCBI taxonomy Id: 48709
Other names: O. cincta
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