STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ocin01_00123Protein phosphatase 1D. (295 aa)    
Predicted Functional Partners:
Ocin01_05911
Leucine-rich repeat serine/threonine-protein kinase 1.
  
 0.861
Ocin01_15190
Mitogen-activated protein kinase 15.
   
 0.811
Ocin01_10203
Mitogen-activated protein kinase.
   
 0.811
Ocin01_01454
Putative serine/threonine-protein kinase C05D10.2.
   
 0.811
Ocin01_15768
TGF-beta-activated kinase 1 and MAP3K7-binding protein 2.
    
 0.752
Ocin01_07955
2-oxoisovalerate dehydrogenase subunit beta, mitochondrial.
   
 0.700
Ocin01_17598
Caseinolytic peptidase B protein.
  
 
 0.692
Ocin01_05357
Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
   
 0.688
Ocin01_18714
Dual serine/threonine and tyrosine protein kinase.
  
 0.684
Ocin01_13910
RING-type domain-containing protein.
   
 0.684
Your Current Organism:
Orchesella cincta
NCBI taxonomy Id: 48709
Other names: O. cincta
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.