STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDR87494.1L-leucine ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily. (233 aa)    
Predicted Functional Partners:
SDR87587.1
L-leucine ABC transporter membrane protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.999
SDR87537.1
L-leucine ABC transporter ATP-binding protein.
 
 
0.989
SDR87633.1
L-leucine ABC transporter membrane protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.988
SDR87665.1
L-leucine-binding protein /L-isoleucine-binding protein /L-valine-binding protein.
 
 
 0.977
SDT01192.1
Amino acid/amide ABC transporter membrane protein 2, HAAT family; Belongs to the binding-protein-dependent transport system permease family.
 
 0.960
SDT01223.1
Amino acid/amide ABC transporter membrane protein 1, HAAT family; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.920
SDT01266.1
Amino acid/amide ABC transporter substrate-binding protein, HAAT family.
 
 
 0.840
SDS79319.1
ABC-2 type transport system ATP-binding protein.
 
   
 
0.824
SDR89422.1
Flagellar motor switch protein FliM; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.
   
   0.734
SDT01146.1
Urea transport system ATP-binding protein.
 
 
0.673
Your Current Organism:
Pseudomonas xinjiangensis
NCBI taxonomy Id: 487184
Other names: CCTCC AB 207151, NRRL B-51270, P. xinjiangensis, Pseudomonas sp. S3-3, Pseudomonas xinjiangensis Liu et al. 2009, strain S3-3
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