Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDR69341.1 | SDR90278.1 | SAMN05216421_0036 | SAMN05216421_0541 | D-erythrose 4-phosphate dehydrogenase; Catalyzes the NAD-dependent conversion of D-erythrose 4- phosphate to 4-phosphoerythronate. | Ribokinase. | 0.480 |
SDR69341.1 | SDR93395.1 | SAMN05216421_0036 | SAMN05216421_0596 | D-erythrose 4-phosphate dehydrogenase; Catalyzes the NAD-dependent conversion of D-erythrose 4- phosphate to 4-phosphoerythronate. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.891 |
SDR69341.1 | SDR93568.1 | SAMN05216421_0036 | SAMN05216421_0599 | D-erythrose 4-phosphate dehydrogenase; Catalyzes the NAD-dependent conversion of D-erythrose 4- phosphate to 4-phosphoerythronate. | 2-keto-3-deoxy-phosphogluconate aldolase. | 0.871 |
SDR69341.1 | SDS48680.1 | SAMN05216421_0036 | SAMN05216421_1614 | D-erythrose 4-phosphate dehydrogenase; Catalyzes the NAD-dependent conversion of D-erythrose 4- phosphate to 4-phosphoerythronate. | FAD/FMN-containing dehydrogenase. | 0.598 |
SDR69341.1 | SDT10062.1 | SAMN05216421_0036 | SAMN05216421_2899 | D-erythrose 4-phosphate dehydrogenase; Catalyzes the NAD-dependent conversion of D-erythrose 4- phosphate to 4-phosphoerythronate. | Transcriptional regulator, RpiR family. | 0.424 |
SDR69341.1 | edd | SAMN05216421_0036 | SAMN05216421_0597 | D-erythrose 4-phosphate dehydrogenase; Catalyzes the NAD-dependent conversion of D-erythrose 4- phosphate to 4-phosphoerythronate. | 6-phosphogluconate dehydratase; Catalyzes the dehydration of 6-phospho-D-gluconate to 2- dehydro-3-deoxy-6-phospho-D-gluconate; Belongs to the IlvD/Edd family. | 0.628 |
SDR69341.1 | pgi | SAMN05216421_0036 | SAMN05216421_0732 | D-erythrose 4-phosphate dehydrogenase; Catalyzes the NAD-dependent conversion of D-erythrose 4- phosphate to 4-phosphoerythronate. | Glucose-6-phosphate isomerase; Belongs to the GPI family. | 0.938 |
SDR69341.1 | pgl | SAMN05216421_0036 | SAMN05216421_0598 | D-erythrose 4-phosphate dehydrogenase; Catalyzes the NAD-dependent conversion of D-erythrose 4- phosphate to 4-phosphoerythronate. | 6-phosphogluconolactonase; Hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate. | 0.665 |
SDR69341.1 | zwf | SAMN05216421_0036 | SAMN05216421_2898 | D-erythrose 4-phosphate dehydrogenase; Catalyzes the NAD-dependent conversion of D-erythrose 4- phosphate to 4-phosphoerythronate. | Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone. | 0.797 |
SDR71548.1 | SDR90278.1 | SAMN05216421_0106 | SAMN05216421_0541 | Glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | Ribokinase. | 0.480 |
SDR71548.1 | SDR93395.1 | SAMN05216421_0106 | SAMN05216421_0596 | Glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.893 |
SDR71548.1 | SDR93568.1 | SAMN05216421_0106 | SAMN05216421_0599 | Glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | 2-keto-3-deoxy-phosphogluconate aldolase. | 0.954 |
SDR71548.1 | SDS48680.1 | SAMN05216421_0106 | SAMN05216421_1614 | Glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | FAD/FMN-containing dehydrogenase. | 0.598 |
SDR71548.1 | SDT10062.1 | SAMN05216421_0106 | SAMN05216421_2899 | Glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | Transcriptional regulator, RpiR family. | 0.424 |
SDR71548.1 | edd | SAMN05216421_0106 | SAMN05216421_0597 | Glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | 6-phosphogluconate dehydratase; Catalyzes the dehydration of 6-phospho-D-gluconate to 2- dehydro-3-deoxy-6-phospho-D-gluconate; Belongs to the IlvD/Edd family. | 0.891 |
SDR71548.1 | pgi | SAMN05216421_0106 | SAMN05216421_0732 | Glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | Glucose-6-phosphate isomerase; Belongs to the GPI family. | 0.948 |
SDR71548.1 | pgl | SAMN05216421_0106 | SAMN05216421_0598 | Glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | 6-phosphogluconolactonase; Hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate. | 0.914 |
SDR71548.1 | zwf | SAMN05216421_0106 | SAMN05216421_2898 | Glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone. | 0.958 |
SDR90278.1 | SDR69341.1 | SAMN05216421_0541 | SAMN05216421_0036 | Ribokinase. | D-erythrose 4-phosphate dehydrogenase; Catalyzes the NAD-dependent conversion of D-erythrose 4- phosphate to 4-phosphoerythronate. | 0.480 |
SDR90278.1 | SDR71548.1 | SAMN05216421_0541 | SAMN05216421_0106 | Ribokinase. | Glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | 0.480 |
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