Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDR94600.1 | SDR94682.1 | SAMN05216421_0619 | SAMN05216421_0620 | Molybdate transport system permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. | Molybdate transport system substrate-binding protein. | 0.999 |
SDR94600.1 | SDR94724.1 | SAMN05216421_0619 | SAMN05216421_0621 | Molybdate transport system permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. | Uncharacterized protein involved in response to NO. | 0.628 |
SDR94600.1 | SDR94769.1 | SAMN05216421_0619 | SAMN05216421_0622 | Molybdate transport system permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. | Hypothetical protein. | 0.428 |
SDR94600.1 | modC | SAMN05216421_0619 | SAMN05216421_0618 | Molybdate transport system permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. | Molybdate transport system ATP-binding protein; Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Molybdate importer (TC 3.A.1.8) family. | 0.998 |
SDR94682.1 | SDR94600.1 | SAMN05216421_0620 | SAMN05216421_0619 | Molybdate transport system substrate-binding protein. | Molybdate transport system permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. | 0.999 |
SDR94682.1 | SDR94724.1 | SAMN05216421_0620 | SAMN05216421_0621 | Molybdate transport system substrate-binding protein. | Uncharacterized protein involved in response to NO. | 0.762 |
SDR94682.1 | SDR94769.1 | SAMN05216421_0620 | SAMN05216421_0622 | Molybdate transport system substrate-binding protein. | Hypothetical protein. | 0.511 |
SDR94682.1 | modC | SAMN05216421_0620 | SAMN05216421_0618 | Molybdate transport system substrate-binding protein. | Molybdate transport system ATP-binding protein; Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Molybdate importer (TC 3.A.1.8) family. | 0.992 |
SDR94724.1 | SDR94600.1 | SAMN05216421_0621 | SAMN05216421_0619 | Uncharacterized protein involved in response to NO. | Molybdate transport system permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. | 0.628 |
SDR94724.1 | SDR94682.1 | SAMN05216421_0621 | SAMN05216421_0620 | Uncharacterized protein involved in response to NO. | Molybdate transport system substrate-binding protein. | 0.762 |
SDR94724.1 | SDR94769.1 | SAMN05216421_0621 | SAMN05216421_0622 | Uncharacterized protein involved in response to NO. | Hypothetical protein. | 0.574 |
SDR94724.1 | SDR94821.1 | SAMN05216421_0621 | SAMN05216421_0623 | Uncharacterized protein involved in response to NO. | Coproporphyrinogen III oxidase, anaerobic; Belongs to the anaerobic coproporphyrinogen-III oxidase family. | 0.546 |
SDR94724.1 | modC | SAMN05216421_0621 | SAMN05216421_0618 | Uncharacterized protein involved in response to NO. | Molybdate transport system ATP-binding protein; Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Molybdate importer (TC 3.A.1.8) family. | 0.676 |
SDR94769.1 | SDR94600.1 | SAMN05216421_0622 | SAMN05216421_0619 | Hypothetical protein. | Molybdate transport system permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. | 0.428 |
SDR94769.1 | SDR94682.1 | SAMN05216421_0622 | SAMN05216421_0620 | Hypothetical protein. | Molybdate transport system substrate-binding protein. | 0.511 |
SDR94769.1 | SDR94724.1 | SAMN05216421_0622 | SAMN05216421_0621 | Hypothetical protein. | Uncharacterized protein involved in response to NO. | 0.574 |
SDR94769.1 | SDR94821.1 | SAMN05216421_0622 | SAMN05216421_0623 | Hypothetical protein. | Coproporphyrinogen III oxidase, anaerobic; Belongs to the anaerobic coproporphyrinogen-III oxidase family. | 0.454 |
SDR94769.1 | modC | SAMN05216421_0622 | SAMN05216421_0618 | Hypothetical protein. | Molybdate transport system ATP-binding protein; Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Molybdate importer (TC 3.A.1.8) family. | 0.428 |
SDR94821.1 | SDR94724.1 | SAMN05216421_0623 | SAMN05216421_0621 | Coproporphyrinogen III oxidase, anaerobic; Belongs to the anaerobic coproporphyrinogen-III oxidase family. | Uncharacterized protein involved in response to NO. | 0.546 |
SDR94821.1 | SDR94769.1 | SAMN05216421_0623 | SAMN05216421_0622 | Coproporphyrinogen III oxidase, anaerobic; Belongs to the anaerobic coproporphyrinogen-III oxidase family. | Hypothetical protein. | 0.454 |
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