STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS21709.1Hypothetical protein. (295 aa)    
Predicted Functional Partners:
SDS21532.1
Hypothetical protein.
       0.750
SDS21574.1
Hypothetical protein.
       0.750
SDS21613.1
Hypothetical protein.
       0.750
SDS21463.1
Hypothetical protein.
       0.718
SDS21660.1
Hypothetical protein.
       0.718
SDS21763.1
Hypothetical protein.
       0.676
SDS21849.1
Hypothetical protein.
       0.639
SDS21892.1
Hypothetical protein.
       0.639
SDS21940.1
Hypothetical protein.
       0.630
SDS22018.1
Hypothetical protein.
       0.630
Your Current Organism:
Pseudomonas xinjiangensis
NCBI taxonomy Id: 487184
Other names: CCTCC AB 207151, NRRL B-51270, P. xinjiangensis, Pseudomonas sp. S3-3, Pseudomonas xinjiangensis Liu et al. 2009, strain S3-3
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.