STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS41540.1alpha-L-glutamate ligase-related protein. (338 aa)    
Predicted Functional Partners:
SDS41494.1
Inactive transglutaminase fused to 7 transmembrane helices.
 
  
 0.956
SDS41589.1
Aminodeoxychorismate synthase, subunit I.
       0.755
SDT26562.1
Glutamate synthase (NADPH) large subunit.
    
 0.713
SDS45676.1
Uncharacterized conserved protein.
 
     0.673
SDS41303.1
2-methylcitrate synthase; Belongs to the citrate synthase family.
    
  0.624
SDS05303.1
Glutaredoxin-like domain.
 
  
 0.575
prpB
Methylisocitrate lyase; Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate. Belongs to the isocitrate lyase/PEP mutase superfamily. Methylisocitrate lyase family.
       0.522
SDS41428.1
Transcriptional regulator, GntR family.
       0.522
SDT03578.1
Protein of unknown function.
  
     0.515
SDS37624.1
Chalcone isomerase-like.
    
 0.514
Your Current Organism:
Pseudomonas xinjiangensis
NCBI taxonomy Id: 487184
Other names: CCTCC AB 207151, NRRL B-51270, P. xinjiangensis, Pseudomonas sp. S3-3, Pseudomonas xinjiangensis Liu et al. 2009, strain S3-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.