STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS58999.1Cytochrome c oxidase cbb3-type subunit 4. (65 aa)    
Predicted Functional Partners:
SDS58944.1
Cytochrome c oxidase cbb3-type subunit 2.
 
 
 0.994
SDS58901.1
Cytochrome c oxidase cbb3-type subunit 1; Belongs to the heme-copper respiratory oxidase family.
 
 
 0.993
SDS59048.1
Cytochrome c oxidase cbb3-type subunit 3; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
 
 0.989
SDT17440.1
Cytochrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
  
 0.952
SDS59096.1
Cytochrome c oxidase accessory protein FixG.
 
  
 0.928
SDS34939.1
Quinohemoprotein ethanol dehydrogenase.
  
 0.881
SDS59271.1
Cytochrome oxidase maturation protein, cbb3-type.
 
 
 0.835
SDS59150.1
Hypothetical protein.
 
     0.784
SDS64625.1
Cytochrome c oxidase subunit 2.
   
 
 0.749
SDT17961.1
Cytochrome c5.
 
  
  0.736
Your Current Organism:
Pseudomonas xinjiangensis
NCBI taxonomy Id: 487184
Other names: CCTCC AB 207151, NRRL B-51270, P. xinjiangensis, Pseudomonas sp. S3-3, Pseudomonas xinjiangensis Liu et al. 2009, strain S3-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.