STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS60368.1Monothiol glutaredoxin; Belongs to the glutaredoxin family. Monothiol subfamily. (107 aa)    
Predicted Functional Partners:
SDS63309.1
Transcriptional regulator, BolA protein family; Belongs to the BolA/IbaG family.
 
 
 0.977
nfuA
Fe/S biogenesis protein NfuA; Involved in iron-sulfur cluster biogenesis. Binds a 4Fe-4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe/S proteins. Could also act as a scaffold/chaperone for damaged Fe/S proteins.
  
 0.922
SDR80104.1
Lipopolysaccharide kinase (Kdo/WaaP) family protein.
    
   0.837
SDS85675.1
Acid stress-induced BolA-like protein IbaG/YrbA, predicted regulator of iron metabolism; Belongs to the BolA/IbaG family.
 
 
 
 0.836
thrS
threonyl-tRNA synthetase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr).
  
 
 0.827
SDS26237.1
Fe-S cluster assembly protein SufA/iron-sulfur cluster assembly protein; Belongs to the HesB/IscA family.
 
 0.823
erpA
Iron-sulfur cluster insertion apoprotein erpA; Required for insertion of 4Fe-4S clusters for at least IspG.
 
 0.787
SDR68684.1
DnaJ like chaperone protein.
     
 0.731
SDT22031.1
Glutaredoxin 3; Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins.
 
 
 0.713
gloB
Hydroxyacylglutathione hydrolase; Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl- glutathione to form glutathione and D-lactic acid.
 
   
 0.647
Your Current Organism:
Pseudomonas xinjiangensis
NCBI taxonomy Id: 487184
Other names: CCTCC AB 207151, NRRL B-51270, P. xinjiangensis, Pseudomonas sp. S3-3, Pseudomonas xinjiangensis Liu et al. 2009, strain S3-3
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