Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDR70166.1 | SDS48680.1 | SAMN05216421_0066 | SAMN05216421_1614 | Trehalose 6-phosphate phosphatase/trehalose 6-phosphate synthase/phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose. | FAD/FMN-containing dehydrogenase. | 0.756 |
SDR70166.1 | SDS64203.1 | SAMN05216421_0066 | SAMN05216421_1898 | Trehalose 6-phosphate phosphatase/trehalose 6-phosphate synthase/phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose. | Catalase. | 0.709 |
SDR70166.1 | SDT10226.1 | SAMN05216421_0066 | SAMN05216421_2903 | Trehalose 6-phosphate phosphatase/trehalose 6-phosphate synthase/phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose. | Superoxide dismutase, Cu-Zn family; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family. | 0.777 |
SDR74288.1 | SDR92578.1 | SAMN05216421_0193 | SAMN05216421_0579 | Peroxiredoxin (alkyl hydroperoxide reductase subunit C). | Superoxide dismutase, Fe-Mn family; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | 0.629 |
SDR74288.1 | SDS64203.1 | SAMN05216421_0193 | SAMN05216421_1898 | Peroxiredoxin (alkyl hydroperoxide reductase subunit C). | Catalase. | 0.723 |
SDR83668.1 | SDS48680.1 | SAMN05216421_0418 | SAMN05216421_1614 | Acyl dehydratase. | FAD/FMN-containing dehydrogenase. | 0.569 |
SDR83668.1 | SDS64203.1 | SAMN05216421_0418 | SAMN05216421_1898 | Acyl dehydratase. | Catalase. | 0.763 |
SDR92578.1 | SDR74288.1 | SAMN05216421_0579 | SAMN05216421_0193 | Superoxide dismutase, Fe-Mn family; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | Peroxiredoxin (alkyl hydroperoxide reductase subunit C). | 0.629 |
SDR92578.1 | SDR94252.1 | SAMN05216421_0579 | SAMN05216421_0611 | Superoxide dismutase, Fe-Mn family; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | Peroxiredoxin (alkyl hydroperoxide reductase subunit C); Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily. | 0.630 |
SDR92578.1 | SDS64203.1 | SAMN05216421_0579 | SAMN05216421_1898 | Superoxide dismutase, Fe-Mn family; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | Catalase. | 0.639 |
SDR92578.1 | SDT10226.1 | SAMN05216421_0579 | SAMN05216421_2903 | Superoxide dismutase, Fe-Mn family; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | Superoxide dismutase, Cu-Zn family; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family. | 0.972 |
SDR94252.1 | SDR92578.1 | SAMN05216421_0611 | SAMN05216421_0579 | Peroxiredoxin (alkyl hydroperoxide reductase subunit C); Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily. | Superoxide dismutase, Fe-Mn family; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | 0.630 |
SDR94252.1 | SDS64203.1 | SAMN05216421_0611 | SAMN05216421_1898 | Peroxiredoxin (alkyl hydroperoxide reductase subunit C); Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily. | Catalase. | 0.723 |
SDS17300.1 | SDS48680.1 | SAMN05216421_1035 | SAMN05216421_1614 | Acyl dehydratase. | FAD/FMN-containing dehydrogenase. | 0.569 |
SDS17300.1 | SDS64203.1 | SAMN05216421_1035 | SAMN05216421_1898 | Acyl dehydratase. | Catalase. | 0.763 |
SDS25099.1 | SDS64203.1 | SAMN05216421_1182 | SAMN05216421_1898 | Transglutaminase-like enzyme, putative cysteine protease. | Catalase. | 0.687 |
SDS48680.1 | SDR70166.1 | SAMN05216421_1614 | SAMN05216421_0066 | FAD/FMN-containing dehydrogenase. | Trehalose 6-phosphate phosphatase/trehalose 6-phosphate synthase/phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose. | 0.756 |
SDS48680.1 | SDR83668.1 | SAMN05216421_1614 | SAMN05216421_0418 | FAD/FMN-containing dehydrogenase. | Acyl dehydratase. | 0.569 |
SDS48680.1 | SDS17300.1 | SAMN05216421_1614 | SAMN05216421_1035 | FAD/FMN-containing dehydrogenase. | Acyl dehydratase. | 0.569 |
SDS48680.1 | SDS64203.1 | SAMN05216421_1614 | SAMN05216421_1898 | FAD/FMN-containing dehydrogenase. | Catalase. | 0.762 |
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