Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDR70034.1 | SDS64299.1 | SAMN05216421_0062 | SAMN05216421_1900 | Hypothetical protein. | Hypothetical protein. | 0.788 |
SDR88310.1 | SDS64299.1 | SAMN05216421_0508 | SAMN05216421_1900 | Flagellar protein FlaG. | Hypothetical protein. | 0.736 |
SDS64203.1 | SDS64252.1 | SAMN05216421_1898 | SAMN05216421_1899 | Catalase. | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | 0.563 |
SDS64203.1 | SDS64299.1 | SAMN05216421_1898 | SAMN05216421_1900 | Catalase. | Hypothetical protein. | 0.614 |
SDS64203.1 | SDS64362.1 | SAMN05216421_1898 | SAMN05216421_1901 | Catalase. | Porin. | 0.563 |
SDS64252.1 | SDS64203.1 | SAMN05216421_1899 | SAMN05216421_1898 | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | Catalase. | 0.563 |
SDS64252.1 | SDS64299.1 | SAMN05216421_1899 | SAMN05216421_1900 | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | Hypothetical protein. | 0.832 |
SDS64252.1 | SDS64362.1 | SAMN05216421_1899 | SAMN05216421_1901 | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | Porin. | 0.873 |
SDS64299.1 | SDR70034.1 | SAMN05216421_1900 | SAMN05216421_0062 | Hypothetical protein. | Hypothetical protein. | 0.788 |
SDS64299.1 | SDR88310.1 | SAMN05216421_1900 | SAMN05216421_0508 | Hypothetical protein. | Flagellar protein FlaG. | 0.736 |
SDS64299.1 | SDS64203.1 | SAMN05216421_1900 | SAMN05216421_1898 | Hypothetical protein. | Catalase. | 0.614 |
SDS64299.1 | SDS64252.1 | SAMN05216421_1900 | SAMN05216421_1899 | Hypothetical protein. | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | 0.832 |
SDS64299.1 | SDS64362.1 | SAMN05216421_1900 | SAMN05216421_1901 | Hypothetical protein. | Porin. | 0.951 |
SDS64299.1 | SDT08985.1 | SAMN05216421_1900 | SAMN05216421_2870 | Hypothetical protein. | Phosphate uptake regulator, PhoU; Plays a role in the regulation of phosphate uptake. | 0.576 |
SDS64299.1 | SDT09064.1 | SAMN05216421_1900 | SAMN05216421_2872 | Hypothetical protein. | Phosphate ABC transporter membrane protein 2, PhoT family. | 0.915 |
SDS64299.1 | SDT09095.1 | SAMN05216421_1900 | SAMN05216421_2873 | Hypothetical protein. | Phosphate ABC transporter membrane protein 1, PhoT family; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. | 0.915 |
SDS64299.1 | pheT | SAMN05216421_1900 | SAMN05216421_1062 | Hypothetical protein. | phenylalanyl-tRNA synthetase beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.503 |
SDS64299.1 | pstB | SAMN05216421_1900 | SAMN05216421_2871 | Hypothetical protein. | Phosphate ABC transporter ATP-binding protein, PhoT family; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family. | 0.915 |
SDS64362.1 | SDS64203.1 | SAMN05216421_1901 | SAMN05216421_1898 | Porin. | Catalase. | 0.563 |
SDS64362.1 | SDS64252.1 | SAMN05216421_1901 | SAMN05216421_1899 | Porin. | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | 0.873 |
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