STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS66889.1Cu+-exporting ATPase. (795 aa)    
Predicted Functional Partners:
SDT25093.1
Copper chaperone CopZ.
  
 
 0.980
SDS66925.1
Transcriptional regulator, MerR family.
 
  
 0.869
SDS66824.1
Potassium/proton antiporter, CPA1 family.
       0.570
SDS52494.1
Copper-resistance protein, CopA family.
 
  
 0.541
SDT10226.1
Superoxide dismutase, Cu-Zn family; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family.
    
 0.536
SDR69271.1
Transcriptional regulator, ArsR family.
  
  
 0.535
SDS53828.1
Cation diffusion facilitator family transporter.
 
  
 0.505
SDR99807.1
Cation diffusion facilitator family transporter.
  
  
 0.478
SDS98067.1
Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
  
    0.471
SDR71485.1
Transcriptional regulator, ArsR family.
  
  
 0.458
Your Current Organism:
Pseudomonas xinjiangensis
NCBI taxonomy Id: 487184
Other names: CCTCC AB 207151, NRRL B-51270, P. xinjiangensis, Pseudomonas sp. S3-3, Pseudomonas xinjiangensis Liu et al. 2009, strain S3-3
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