Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDS93008.1 | SDS93051.1 | SAMN05216421_2502 | SAMN05216421_2503 | Protein of unknown function. | Cation diffusion facilitator family transporter. | 0.850 |
SDS93008.1 | SDS93101.1 | SAMN05216421_2502 | SAMN05216421_2504 | Protein of unknown function. | Polar amino acid transport system substrate-binding protein. | 0.823 |
SDS93008.1 | SDS93147.1 | SAMN05216421_2502 | SAMN05216421_2505 | Protein of unknown function. | 2'-5' RNA ligase; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family. | 0.507 |
SDS93008.1 | SDS93190.1 | SAMN05216421_2502 | SAMN05216421_2506 | Protein of unknown function. | Hypothetical protein. | 0.507 |
SDS93051.1 | SDS93008.1 | SAMN05216421_2503 | SAMN05216421_2502 | Cation diffusion facilitator family transporter. | Protein of unknown function. | 0.850 |
SDS93051.1 | SDS93101.1 | SAMN05216421_2503 | SAMN05216421_2504 | Cation diffusion facilitator family transporter. | Polar amino acid transport system substrate-binding protein. | 0.945 |
SDS93051.1 | SDS93147.1 | SAMN05216421_2503 | SAMN05216421_2505 | Cation diffusion facilitator family transporter. | 2'-5' RNA ligase; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family. | 0.519 |
SDS93051.1 | SDS93190.1 | SAMN05216421_2503 | SAMN05216421_2506 | Cation diffusion facilitator family transporter. | Hypothetical protein. | 0.507 |
SDS93101.1 | SDS93008.1 | SAMN05216421_2504 | SAMN05216421_2502 | Polar amino acid transport system substrate-binding protein. | Protein of unknown function. | 0.823 |
SDS93101.1 | SDS93051.1 | SAMN05216421_2504 | SAMN05216421_2503 | Polar amino acid transport system substrate-binding protein. | Cation diffusion facilitator family transporter. | 0.945 |
SDS93101.1 | SDS93147.1 | SAMN05216421_2504 | SAMN05216421_2505 | Polar amino acid transport system substrate-binding protein. | 2'-5' RNA ligase; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family. | 0.507 |
SDS93101.1 | SDS93190.1 | SAMN05216421_2504 | SAMN05216421_2506 | Polar amino acid transport system substrate-binding protein. | Hypothetical protein. | 0.507 |
SDS93147.1 | SDS93008.1 | SAMN05216421_2505 | SAMN05216421_2502 | 2'-5' RNA ligase; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family. | Protein of unknown function. | 0.507 |
SDS93147.1 | SDS93051.1 | SAMN05216421_2505 | SAMN05216421_2503 | 2'-5' RNA ligase; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family. | Cation diffusion facilitator family transporter. | 0.519 |
SDS93147.1 | SDS93101.1 | SAMN05216421_2505 | SAMN05216421_2504 | 2'-5' RNA ligase; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family. | Polar amino acid transport system substrate-binding protein. | 0.507 |
SDS93147.1 | SDS93190.1 | SAMN05216421_2505 | SAMN05216421_2506 | 2'-5' RNA ligase; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family. | Hypothetical protein. | 0.773 |
SDS93147.1 | SDS93244.1 | SAMN05216421_2505 | SAMN05216421_2507 | 2'-5' RNA ligase; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family. | Hypothetical protein. | 0.475 |
SDS93190.1 | SDS93008.1 | SAMN05216421_2506 | SAMN05216421_2502 | Hypothetical protein. | Protein of unknown function. | 0.507 |
SDS93190.1 | SDS93051.1 | SAMN05216421_2506 | SAMN05216421_2503 | Hypothetical protein. | Cation diffusion facilitator family transporter. | 0.507 |
SDS93190.1 | SDS93101.1 | SAMN05216421_2506 | SAMN05216421_2504 | Hypothetical protein. | Polar amino acid transport system substrate-binding protein. | 0.507 |
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