STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS95791.1Gamma-glutamyltransferase 1 Threonine peptidase. MEROPS family T03. (588 aa)    
Predicted Functional Partners:
SDT26562.1
Glutamate synthase (NADPH) large subunit.
     
 0.855
purL
Phosphoribosylformylglycinamidine synthase; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate.
    
  0.725
SDS74444.1
Na+/proline symporter.
  
 
 0.689
SDS95880.1
Putative glutamine amidotransferase.
       0.663
SDS95835.1
Putative amidoligase enzyme.
       0.661
SDR73380.1
Leucine dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
  
 0.646
gshB
Glutathione synthase; Belongs to the prokaryotic GSH synthase family.
    
 0.604
SDS29255.1
NADPH-glutathione reductase.
     
 0.596
SDS49098.1
Glutathione peroxidase; Belongs to the glutathione peroxidase family.
     
 0.596
pepA
Aminopeptidase A. Metallo peptidase. MEROPS family M17; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides.
     
 0.595
Your Current Organism:
Pseudomonas xinjiangensis
NCBI taxonomy Id: 487184
Other names: CCTCC AB 207151, NRRL B-51270, P. xinjiangensis, Pseudomonas sp. S3-3, Pseudomonas xinjiangensis Liu et al. 2009, strain S3-3
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