STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDT08851.1PAS/PAC sensor signal transduction histidine kinase. (431 aa)    
Predicted Functional Partners:
SDT08805.1
Two component transcriptional regulator, winged helix family.
 0.982
SDT14393.1
PAS domain S-box-containing protein.
 
0.960
SDS28309.1
Signal transduction histidine kinase.
 
0.937
SDS65845.1
PAS fold-containing protein.
 
0.932
SDT10328.1
PAS domain S-box-containing protein.
  
 0.906
SDT24777.1
Hypothetical protein.
 
0.885
SDT10775.1
Two-component system, chemotaxis family, CheB/CheR fusion protein; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
  
0.855
SDT11167.1
Two-component system, OmpR family, response regulator PfeR.
 0.852
SDS28257.1
Response regulator receiver domain-containing protein.
  0.851
SDS50400.1
Two-component system, OmpR family, response regulator RstA.
 0.850
Your Current Organism:
Pseudomonas xinjiangensis
NCBI taxonomy Id: 487184
Other names: CCTCC AB 207151, NRRL B-51270, P. xinjiangensis, Pseudomonas sp. S3-3, Pseudomonas xinjiangensis Liu et al. 2009, strain S3-3
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