STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APV34876.1Flavin reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (310 aa)    
Predicted Functional Partners:
APV34875.1
Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    0.944
APV34877.1
Monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.942
APV35405.1
Flavin oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.923
APV36733.1
FMN reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.903
APV36946.1
Riboflavin biosynthesis protein RibF; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ribF family.
    
  0.902
APV34874.1
Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.881
APV34878.1
Carnitine dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aldehyde dehydrogenase family.
 
     0.824
APV34873.1
GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.609
APV34872.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.541
APV37475.1
Cytosine permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the purine-cytosine permease (2.A.39) family.
       0.408
Your Current Organism:
Acinetobacter soli
NCBI taxonomy Id: 487316
Other names: Acinetobacter soli Kim et al. 2009, Acinetobacter sp. Ba6, JCM 15062, KCTC 22184
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