STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A5707_03810Hypothetical protein; Incomplete; too short partial abutting assembly gap; missing start and stop; Derived by automated computational analysis using gene prediction method: Protein Homology. (326 aa)    
Predicted Functional Partners:
OBI43907.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.894
OBI43942.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.885
OBI43908.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.870
A5707_07895
Hypothetical protein; Incomplete; too short partial abutting assembly gap; missing start and stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.852
OBI45840.1
PaaX domain-containing protein, C- domain protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.774
OBI43909.1
glutamyl-tRNA amidotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.768
OBI47962.1
LytTR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.761
OBI45979.1
Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.758
OBI42961.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.755
cobB
NAD-dependent protein deacylase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sirtuin family. Class III subfamily.
   
    0.754
Your Current Organism:
Mycobacterium kyorinense
NCBI taxonomy Id: 487514
Other names: DSM 45166, JCM 15038, M. kyorinense, Mycobacterium kyorinense Okazaki et al. 2009, strain KUM 060204
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.