STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OBI50656.1MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (143 aa)    
Predicted Functional Partners:
OBI50658.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.866
OBI50657.1
rRNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.846
OBI50733.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.768
OBI50655.1
Polyketide cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.588
OBI50704.1
Chorismate mutase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.578
OBI52193.1
DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.563
A5707_00370
Hypothetical protein; Part of cytochrome c oxidase, its function is unknown. Belongs to the cytochrome c oxidase bacterial subunit CtaF family.
  
   
 0.490
OBI45299.1
Phosphomannomutase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.486
OBI42252.1
MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.479
OBI50973.1
dephospho-CoA kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.467
Your Current Organism:
Mycobacterium kyorinense
NCBI taxonomy Id: 487514
Other names: DSM 45166, JCM 15038, M. kyorinense, Mycobacterium kyorinense Okazaki et al. 2009, strain KUM 060204
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.