STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OBI50570.1Creatininase; Derived by automated computational analysis using gene prediction method: Protein Homology. (274 aa)    
Predicted Functional Partners:
OBI45826.1
Mycofactocin system glycosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.886
OBI50569.1
MBL fold metallo-hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
OBI45829.1
Mycofactocin system protein MftB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.613
OBI45828.1
Mycofactocin radical SAM maturase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.559
OBI51022.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.527
OBI50571.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.478
OBI40698.1
Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.437
OBI40401.1
Dipeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase M24B family.
    
  0.437
OBI48090.1
X-Pro dipeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.437
OBI41350.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.433
Your Current Organism:
Mycobacterium kyorinense
NCBI taxonomy Id: 487514
Other names: DSM 45166, JCM 15038, M. kyorinense, Mycobacterium kyorinense Okazaki et al. 2009, strain KUM 060204
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.