Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
OBI48953.1Acyl dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. (172 aa)    
Predicted Functional Partners:
OBI48952.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.966
OBI48955.1
(2Fe-2S)-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.920
OBI48951.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.887
OBI48964.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.872
OBI48954.1
ATP-dependent acyl-CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.871
OBI48947.1
3-oxoacyl-ACP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.772
OBI41720.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.763
OBI47227.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.763
OBI48963.1
Secreted hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.759
OBI53997.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.751
Your Current Organism:
Mycobacterium kyorinense
NCBI taxonomy Id: 487514
Other names: DSM 45166, JCM 15038, M. kyorinense, Mycobacterium kyorinense Okazaki et al. 2009, strain KUM 060204
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