STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OBI47603.1Guanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology. (231 aa)    
Predicted Functional Partners:
OBI44469.1
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.848
OBI42716.1
Stage II sporulation protein E; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.829
OBI50965.1
Adenylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.795
OBI43804.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.794
OBI44470.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.790
OBI40362.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.790
OBI47604.1
Cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.749
OBI47441.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.745
OBI42306.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.691
OBI43786.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.634
Your Current Organism:
Mycobacterium kyorinense
NCBI taxonomy Id: 487514
Other names: DSM 45166, JCM 15038, M. kyorinense, Mycobacterium kyorinense Okazaki et al. 2009, strain KUM 060204
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.