STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OBI46387.1Secretion protein EspG; Derived by automated computational analysis using gene prediction method: Protein Homology. (280 aa)    
Predicted Functional Partners:
OBI46394.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.930
OBI46388.1
Secretion protein EspD; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.913
OBI46389.1
Type VII secretion AAA-ATPase EccA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.870
OBI46390.1
Type VII secretion protein EccB; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.868
OBI46391.1
Type VII secretion protein EccCa; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.826
OBI46392.1
Type VII secretion protein EccCb; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.669
OBI46396.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.662
OBI46395.1
Type VII secretion protein EsxB; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.608
OBI46393.1
PbsX family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.603
OBI50096.1
Type VII secretion protein EccB; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.587
Your Current Organism:
Mycobacterium kyorinense
NCBI taxonomy Id: 487514
Other names: DSM 45166, JCM 15038, M. kyorinense, Mycobacterium kyorinense Okazaki et al. 2009, strain KUM 060204
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.